Serialized Form

Class AbstractMainSelectionPanel extends javax.swing.JPanel implements Serializable

Serialized Fields

p1

javax.swing.JPanel p1
First panel contains input, output information


p2

javax.swing.JPanel p2
Second panel contains options


p3

javax.swing.JPanel p3
Third panel contains action buttons


model

java.lang.String model
Model type


action

java.lang.String action
Action type


sel

SelectionOptions sel
Its data model


paramFileName

java.lang.String paramFileName

input

javax.swing.JTextField input

output

javax.swing.JTextField output

noSt

javax.swing.JTextField noSt

noPYr

javax.swing.JTextField noPYr

lenPYr

javax.swing.JTextField lenPYr

noHSt

javax.swing.JTextField noHSt

verbose

javax.swing.JCheckBox verbose


Class AdvancedOptionWindow extends javax.swing.JFrame implements Serializable

Serialized Fields

selop

SelectionOptions selop
A reference to SelectionOptions object


dist_type1

javax.swing.JComboBox dist_type1
List of input fields


dist_type2

javax.swing.JComboBox dist_type2

no_per_dist

javax.swing.JTextField no_per_dist

no_seq_cross

javax.swing.JTextField no_seq_cross

no_restarts

javax.swing.JTextField no_restarts

em_precision

javax.swing.JTextField em_precision

no_simulations

javax.swing.JTextField no_simulations

min_no_hidden_states

javax.swing.JTextField min_no_hidden_states

max_no_hidden_states

javax.swing.JTextField max_no_hidden_states


Class FileMenuAction extends javax.swing.AbstractAction implements Serializable

serialVersionUID: 1l


Class GraphcisMenuListener extends javax.swing.AbstractAction implements Serializable

serialVersionUID: 1l


Class HelpMenuAction extends javax.swing.AbstractAction implements Serializable

serialVersionUID: -1l


Class HMMSelectionPanel extends AbstractMainSelectionPanel implements Serializable


Class HMMTool extends java.awt.Component implements Serializable


Class HMMToolMenu extends javax.swing.JMenuBar implements Serializable

serialVersionUID: 1l


Class NHMMSelectionPanel extends AbstractMainSelectionPanel implements Serializable

Serialized Fields

input2

javax.swing.JTextField input2

no_predictor

javax.swing.JTextField no_predictor


Class PlotsWindow extends javax.swing.JFrame implements Serializable

Serialized Fields

prob

OutputData prob
Probabilities of each station for different states


xInterval

float xInterval
Interval of x ticks


yInterval

float yInterval
Interval of y ticks


xMin

float xMin
Minimum value of x axis


yMin

float yMin
Minimum value of y axis


xTickMarks

java.lang.String[] xTickMarks

yTickMarks

java.lang.String[] yTickMarks


Class ProbabilityPlot extends javax.swing.JPanel implements Serializable

Serialized Fields

myWidth

int myWidth
Width


myHeight

int myHeight
Height


xTitle

java.lang.String xTitle
Title of the x axis


yTitle

java.lang.String yTitle
Title of the y axis


stations

StationInfo stations
Station location


probs

double[] probs
Probability for certen state at each station


graphName

java.lang.String graphName
Name of the graph


xTickMarks

java.lang.String[] xTickMarks

yTickMarks

java.lang.String[] yTickMarks

lonData

float[] lonData

latData

float[] latData

rectW

float rectW
Drawing rectangle size


rectH

float rectH


Class TextPlot extends javax.swing.JPanel implements Serializable

Serialized Fields

myWidth

int myWidth
Width


myHeight

int myHeight
Height


rectW

float rectW
Drawing rectangle size


rectH

float rectH

txt

java.lang.String[] txt
Text contents